Ocean Modeling Discussion

Hi Mark & Kate,

There seem to be several projects (more or less advanced) by people interested in
using xarray, dask, esmf,... Our original idea with PyCNAL is to have several modules,
based on a PyCNAL-core lib (containing grid objects "a la pyroms") with a module for
grid generation, regridding ...

the griddata function from numpy is not working correctly. I have replaced it by the one from scipy.interpolate
the call to the function is a bit different so there is an extra-step here:


import scipy.interpolate as scipyint

# interpolate new bathymetry
lon, lat = np.meshgrid(lons, lats ...

try : "which f2py" in a terminal. what happens ?

ok first you can fix the problem of libgridgen.so by simply copying it into the directory where pyroms is installed.

second, rename makefile2 as makefile and run "make f2py". What happens ?

is f2py in your PATH ? what is your python version ? and OS ?
can you copy/paste the section of the makefile for f2py/scrip.so

best,
raphael

hi chenzhen,

we also have found out this problem with new versions of matplotlib. The fix is done and is on its way
to github. Regarding the scrip.so, you need to compile scrip with f2py (make f2py).

best,
raphael

hi,

We are working on a way to distribute those scripts and examples. In the meantime,
I can send you the scripts if you send me an e-mail to raphael @ esm.rutgers.edu
(no spaces)

best,
raphael

hi,

I think your /usr/bin/nc-config does not belong to the netcdf you have compiled with ifort in /home/fkomijani/NETCDF/

I bet it comes from a precompiled linux package you have installed with apt-get/yum/...
most linux distributions have netcdf packages (including dev files) compiled with gcc ...