Search found 15 matches

by Arvin_Yin
Sun Jun 17, 2018 2:14 am
Forum: ROMS Discussion
Topic: How can I compile ROMS with MPI3
Replies: 3
Views: 3081

Re: How can I compile ROMS with MPI3

Hi kate
Tkanks for your reply!
I'm still trying.
I found that I have done it before.
But now I got a new problem
"
cd /NSFCGZ/nsfc2015_250/yinp/Projects/upwelling/Build; /NSFCGZ/app/MPI/Gnu/MPICH/3.2-gcc4.9.2-dyn/bin/mpif90 -c -frepack-arrays -O3 -ffast-math -ffree-form -ffree-line-length-none ...
by Arvin_Yin
Mon Jun 11, 2018 4:23 am
Forum: ROMS Discussion
Topic: How can I compile ROMS with MPI3
Replies: 3
Views: 3081

How can I compile ROMS with MPI3

Hi everyone.
My system only got mpi3. I searched this forum found
it is possible to compile ROMS with mpi3.
But how? Since in bash.bash, there's only two choices: mpich and mpich2.
Hope for someone's help. I will really appreciate it!
by Arvin_Yin
Mon Sep 28, 2015 1:35 pm
Forum: ROMS Adjoint
Topic: Can't run my IS4D-Var case Gnorm = NaN
Replies: 8
Views: 12033

Re: Can't run my IS4D-Var case Gnorm = NaN

Many thanks.

For above situation, try to use super observation file instead.
Yes, it works!

I saw the log file you attached and found TLM increments are zero even though ROMS continuing the intergration. I was wondering why this value is appearing.

Would you give same value to nHIS and nOBC ...
by Arvin_Yin
Mon Sep 28, 2015 3:15 am
Forum: ROMS Adjoint
Topic: Can't run my IS4D-Var case Gnorm = NaN
Replies: 8
Views: 12033

Re: Can't run my IS4D-Var case Gnorm = NaN

Hi,
Does your domain include equator?
If it's ok for you, I want to see your model domain.

-JH
Hi, JH
Thanks.
My domain doesn't include equator.It's 16N - 24N, 105E - 132E, in north South China Sea.

And I have another question while I compile with SANITY_CHECK, the error goes:

cd /mnt/volume04 ...
by Arvin_Yin
Sat Sep 26, 2015 7:52 am
Forum: ROMS Adjoint
Topic: Can't run my IS4D-Var case Gnorm = NaN
Replies: 8
Views: 12033

Can't run my IS4D-Var case Gnorm = NaN

Hi, everyone!

When I run my IS4D-Var model, it blows up at the beginning of the first inner loop. The log file shows:

<< Descent Algorithm >
(001,000): Initial gradient norm, Gnorm = NaN

< 4D Variational Data Assimilation, Outer = 001, Inner = 001 >
STEP KINETIC_ENRG POTEN_ENRG TOTAL_ENRG NET ...
by Arvin_Yin
Sat Sep 05, 2015 9:14 am
Forum: ROMS Adjoint
Topic: Tangent Initial Norm is NaN
Replies: 2
Views: 7138

Re: Tangent Initial Norm is NaN

Hi, leon

I believe you have solved this problem already. Now I have the similar error like you
in my IS4D-Var run, my initial gradient norm (Gnorm) is NaN.

Could you tell me more about this error and how you solved it?

Thank you very much.
by Arvin_Yin
Thu Aug 20, 2015 9:31 am
Forum: ROMS Adjoint
Topic: Use grided AVISO SLA data as observation data
Replies: 2
Views: 4879

Use grided AVISO SLA data as observation data

Hi All

I want to use grided AVISO SLA data as observation data in my 4D-Var run.

My question is should I use grided AVISO SLA data directly in the observation file
or should I add mean sea level data to grided AVISO SLA data to make it become SSH data first
and then write it into observation ...
by Arvin_Yin
Fri Jul 31, 2015 3:11 am
Forum: ROMS Adjoint
Topic: Input error when including boundary conditions in 4DVar
Replies: 2
Views: 4374

Re: Input error when including boundary conditions in 4DVar

Hi, all.

Now I know that this error occur because I have wrong 'NOBC' number in ocean.in file.

Nbrec=1+NTIMES/NOBC should be 10 as the error say.

I don't know why the size of 'obc_adjust' have to be 10. So, it's a new question.

Thanks for your help.
by Arvin_Yin
Tue Jul 21, 2015 9:14 am
Forum: ROMS Adjoint
Topic: Input error when including boundary conditions in 4DVar
Replies: 2
Views: 4374

Input error when including boundary conditions in 4DVar

Hi, everyone!

I have successuflly run the I4D-Var model without "ADJUST_BOUNDARY", , then I defined "ADJUST_BOUNDARY", but I got this error:

<<<< 4D Variational Data Assimilation, Outer = 001, Inner = 000 >>>>

INITIAL: Configuring and initializing forward nonlinear model ...
*******

NETCDF ...
by Arvin_Yin
Tue Apr 21, 2015 9:16 am
Forum: ROMS Discussion
Topic: Problems with unforced model -- unrealistic circulation
Replies: 9
Views: 9755

Re: Problems with unforced model -- unrealistic circulation

Thank you for all the replies.
I will try one by one and report later.
by Arvin_Yin
Mon Apr 20, 2015 12:54 pm
Forum: ROMS Discussion
Topic: Problems with unforced model -- unrealistic circulation
Replies: 9
Views: 9755

Re: Problems with unforced model -- unrealistic circulation

Thanks.
I will read these papers. Then, what are the suitable range for rx numbers?
by Arvin_Yin
Sun Apr 19, 2015 3:17 am
Forum: ROMS Discussion
Topic: Problems with unforced model -- unrealistic circulation
Replies: 9
Views: 9755

Re: Problems with unforced model -- unrealistic circulation

It looks like the standard pressure gradient error-driven currents. What are your Beckmann and Haney numbers? You didn't show that. Is your stratification a function of z only?

Thank you, Kate!

My Beckmann and Haney numbers are
Maximum grid stiffness ratios:
rx0 = 3.661005E-01 (Beckmann and ...
by Arvin_Yin
Sat Apr 18, 2015 2:48 pm
Forum: ROMS Discussion
Topic: Problems with unforced model -- unrealistic circulation
Replies: 9
Views: 9755

Problems with unforced model -- unrealistic circulation

Hi,all
I am modeling the M2 internal tide in South China Sea. First I run the model without any forcing in the domain. The initial T/S are horizontally uniform. Initial velocity and ssh are set to zero. Then I run the model for two weeks. I thought that the ocean would remains at rest when unforced ...
by Arvin_Yin
Mon Dec 22, 2014 9:55 am
Forum: ROMS Discussion
Topic: HYCOM data serve as initial and boundary conditions
Replies: 3
Views: 3322

Re: HYCOM data serve as initial and boundary conditions

kate wrote:We have some Python tools for doing this, dependent on pyroms.
Thank you, kate! You are so kind. I searched "pyroms" and found this link
https://github.com/kshedstrom/pyroms
Is it right? I have never use Python before, but now I couldn't wait to learn it.
by Arvin_Yin
Sun Dec 21, 2014 2:12 pm
Forum: ROMS Discussion
Topic: HYCOM data serve as initial and boundary conditions
Replies: 3
Views: 3322

HYCOM data serve as initial and boundary conditions

Hi everydody. I want to use HYCOM data to generate my own initial and boundary condition files. But I am very confused about the interpolation.

I used the RNT toolbox before. First I fill the HYCOM data use linear interpolation, then use rnt_2Doa to interpolate HYCOM data to ROMS grid, at last do ...