Netcdf 3.6.3 problem

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LRasmuson
Posts: 9
Joined: Mon Feb 28, 2011 5:48 pm
Location: Oregon Institute of Marine Biology

Netcdf 3.6.3 problem

#1 Unread post by LRasmuson »

Hi,

When I am trying to install Netcdf everything seems to go fine until I run make check and then I receive error messages. I have posted the log history from my attempt. I am using the post from Dr. MacCready's website at UW and using 3.6.3 so I can try to avoid a lot of the problems that it appears people are having with Netcdf 4.

Making check in f90
make[1]: Nothing to be done for `check'.
Making check in fortran
make check-am
make[2]: Nothing to be done for `check-am'.
Making check in libsrc
make check-am
make t_nc
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -m32 -MT t_nc-t_nc.o -MD -MP -MF .deps/t_nc-t_nc.Tpo -c -o t_nc-t_nc.o `test -f 't_nc.c' || echo './'`t_nc.c
mv -f .deps/t_nc-t_nc.Tpo .deps/t_nc-t_nc.Po
/bin/sh ../libtool --tag=CC --mode=link cc -m32 -o t_nc t_nc-t_nc.o libnetcdf.la
libtool: link: cc -m32 -o t_nc t_nc-t_nc.o ./.libs/libnetcdf.a
make check-TESTS
dimrename: IXX
nc_close ret = 0

reopen id = 3 for filename test.nc
NC done
GATTR VAR VATTR
VATTR
VATTR
VATTR
VATTR
VATTR
fill_seq indices 1 2 3 75.000000 != 2.718282
Done
got val = 3.250000
got val = 0.000000
got val = 2.718282
got val = 82555
got val = 97
got NC_CHAR val = A (0x41)
got NC_CHAR val = B (0x42)
got NC_CHAR val = "The red death had long devastated the country."
got val = A (0x41)
got val = B (0x42)
got val = "The red death had long devastated the country."
got vals = 0.000000 ... 447.000000
re nc_close ret = 0
PASS: t_nc
==================
All 1 tests passed
==================
Making check in nctest
make nctest
depbase=`echo add.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -m32 -MT add.o -MD -MP -MF $depbase.Tpo -c -o add.o add.c &&\
mv -f $depbase.Tpo $depbase.Po
depbase=`echo atttests.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -m32 -MT atttests.o -MD -MP -MF $depbase.Tpo -c -o atttests.o atttests.c &&\
mv -f $depbase.Tpo $depbase.Po
depbase=`echo cdftests.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -m32 -MT cdftests.o -MD -MP -MF $depbase.Tpo -c -o cdftests.o cdftests.c &&\
mv -f $depbase.Tpo $depbase.Po
depbase=`echo dimtests.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -m32 -MT dimtests.o -MD -MP -MF $depbase.Tpo -c -o dimtests.o dimtests.c &&\
mv -f $depbase.Tpo $depbase.Po
depbase=`echo driver.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -m32 -MT driver.o -MD -MP -MF $depbase.Tpo -c -o driver.o driver.c &&\
mv -f $depbase.Tpo $depbase.Po
depbase=`echo emalloc.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -m32 -MT emalloc.o -MD -MP -MF $depbase.Tpo -c -o emalloc.o emalloc.c &&\
mv -f $depbase.Tpo $depbase.Po
depbase=`echo error.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -m32 -MT error.o -MD -MP -MF $depbase.Tpo -c -o error.o error.c &&\
mv -f $depbase.Tpo $depbase.Po
depbase=`echo misctest.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -m32 -MT misctest.o -MD -MP -MF $depbase.Tpo -c -o misctest.o misctest.c &&\
mv -f $depbase.Tpo $depbase.Po
depbase=`echo rec.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -m32 -MT rec.o -MD -MP -MF $depbase.Tpo -c -o rec.o rec.c &&\
mv -f $depbase.Tpo $depbase.Po
depbase=`echo slabs.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -m32 -MT slabs.o -MD -MP -MF $depbase.Tpo -c -o slabs.o slabs.c &&\
mv -f $depbase.Tpo $depbase.Po
depbase=`echo val.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -m32 -MT val.o -MD -MP -MF $depbase.Tpo -c -o val.o val.c &&\
mv -f $depbase.Tpo $depbase.Po
depbase=`echo vardef.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -m32 -MT vardef.o -MD -MP -MF $depbase.Tpo -c -o vardef.o vardef.c &&\
mv -f $depbase.Tpo $depbase.Po
depbase=`echo varget.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -m32 -MT varget.o -MD -MP -MF $depbase.Tpo -c -o varget.o varget.c &&\
mv -f $depbase.Tpo $depbase.Po
depbase=`echo vargetg.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -m32 -MT vargetg.o -MD -MP -MF $depbase.Tpo -c -o vargetg.o vargetg.c &&\
mv -f $depbase.Tpo $depbase.Po
depbase=`echo varput.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -m32 -MT varput.o -MD -MP -MF $depbase.Tpo -c -o varput.o varput.c &&\
mv -f $depbase.Tpo $depbase.Po
depbase=`echo varputg.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -m32 -MT varputg.o -MD -MP -MF $depbase.Tpo -c -o varputg.o varputg.c &&\
mv -f $depbase.Tpo $depbase.Po
depbase=`echo vartests.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -m32 -MT vartests.o -MD -MP -MF $depbase.Tpo -c -o vartests.o vartests.c &&\
mv -f $depbase.Tpo $depbase.Po
depbase=`echo vputget.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -m32 -MT vputget.o -MD -MP -MF $depbase.Tpo -c -o vputget.o vputget.c &&\
mv -f $depbase.Tpo $depbase.Po
depbase=`echo vputgetg.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -m32 -MT vputgetg.o -MD -MP -MF $depbase.Tpo -c -o vputgetg.o vputgetg.c &&\
mv -f $depbase.Tpo $depbase.Po
/bin/sh ../libtool --tag=CC --mode=link cc -m32 -L../libsrc -o nctest add.o atttests.o cdftests.o dimtests.o driver.o emalloc.o error.o misctest.o rec.o slabs.o val.o vardef.o varget.o vargetg.o varput.o varputg.o vartests.o vputget.o vputgetg.o -lm ../libsrc/libnetcdf.la
libtool: link: cc -m32 -o nctest add.o atttests.o cdftests.o dimtests.o driver.o emalloc.o error.o misctest.o rec.o slabs.o val.o vardef.o varget.o vargetg.o varput.o varputg.o vartests.o vputget.o vputgetg.o -L/Users/lrasmuson/src/netcdf-3.6.3/libsrc -lm ../libsrc/.libs/libnetcdf.a
make check-TESTS
Testing V2 API with 2 different netCDF formats.


Switching to netCDF classic format.
*** Testing nccreate ... ok ***
*** Testing ncopen ... ok ***
*** Testing ncredef ... ok ***
*** Testing ncendef ... ok ***
*** Testing ncclose ... ok ***
*** Testing ncinquire ... ok ***
*** Testing ncsync ... ok ***
*** Testing ncabort ... ok ***
*** Testing ncdimdef ... ok ***
*** Testing ncdimid ... ok ***
*** Testing ncdiminq ... ok ***
*** Testing ncdimrename ... ok ***
*** Testing ncvardef ... ok ***
*** Testing ncvarid ... ok ***
*** Testing ncvarinq ... ok ***
*** Testing ncvarput1 ... ok ***
*** Testing ncvarget1 ... ok ***
*** Testing ncvarput ... ok ***
*** Testing ncvarget ... ok ***
*** Testing ncvarputg ... ok ***
*** Testing ncvargetg ... ok ***
*** Testing ncrecinq ... ok ***
*** Testing ncrecput ... ok ***
*** Testing ncrecget ... ok ***
*** Testing ncvarrename ... ok ***
*** Testing ncattput ... ok ***
*** Testing ncattinq ... ok ***
*** Testing ncattget ... ok ***
*** Testing ncattcopy ... ok ***
*** Testing ncattname ... ok ***
*** Testing ncattrename ... ok ***
*** Testing ncattdel ... ok ***
*** Testing nctypelen ... ok ***


Switching to 64-bit offset format.
*** Testing nccreate ... ok ***
*** Testing ncopen ... ok ***
*** Testing ncredef ... ok ***
*** Testing ncendef ... ok ***
*** Testing ncclose ... ok ***
*** Testing ncinquire ... ok ***
*** Testing ncsync ... ok ***
*** Testing ncabort ... ok ***
*** Testing ncdimdef ... ok ***
*** Testing ncdimid ... ok ***
*** Testing ncdiminq ... ok ***
*** Testing ncdimrename ... ok ***
*** Testing ncvardef ... ok ***
*** Testing ncvarid ... ok ***
*** Testing ncvarinq ... ok ***
*** Testing ncvarput1 ... ok ***
*** Testing ncvarget1 ... ok ***
*** Testing ncvarput ... ok ***
*** Testing ncvarget ... ok ***
*** Testing ncvarputg ... ok ***
*** Testing ncvargetg ... ok ***
*** Testing ncrecinq ... ok ***
*** Testing ncrecput ... ok ***
*** Testing ncrecget ... ok ***
*** Testing ncvarrename ... ok ***
*** Testing ncattput ... ok ***
*** Testing ncattinq ... ok ***
*** Testing ncattget ... ok ***
*** Testing ncattcopy ... ok ***
*** Testing ncattname ... ok ***
*** Testing ncattrename ... ok ***
*** Testing ncattdel ... ok ***
*** Testing nctypelen ... ok ***

Total number of failures: 0
nctest SUCCESS!!!
PASS: nctest
PASS: compare_test_files.sh
==================
All 2 tests passed
==================
Making check in ncgen
make check-TESTS
*** Testing ncgen.
*** creating classic file c0.nc from c0.cdl...
*** creating 64-bit offset file c0_64.nc from c0.cdl...
*** Test successful!
PASS: run_tests.sh
==================
All 1 tests passed
==================
Making check in ncdump
make check-am
make rewrite-scalar ctest ctest64 ncdump tst_utf8
depbase=`echo rewrite-scalar.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../nc_test -I../libsrc -I../libsrc -m32 -MT rewrite-scalar.o -MD -MP -MF $depbase.Tpo -c -o rewrite-scalar.o rewrite-scalar.c &&\
mv -f $depbase.Tpo $depbase.Po
/bin/sh ../libtool --tag=CC --mode=link cc -m32 -o rewrite-scalar rewrite-scalar.o -lm ../libsrc/libnetcdf.la
libtool: link: cc -m32 -o rewrite-scalar rewrite-scalar.o -lm ../libsrc/.libs/libnetcdf.a
depbase=`echo ctest.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../nc_test -I../libsrc -I../libsrc -m32 -MT ctest.o -MD -MP -MF $depbase.Tpo -c -o ctest.o ctest.c &&\
mv -f $depbase.Tpo $depbase.Po
/bin/sh ../libtool --tag=CC --mode=link cc -m32 -o ctest ctest.o -lm ../libsrc/libnetcdf.la
libtool: link: cc -m32 -o ctest ctest.o -lm ../libsrc/.libs/libnetcdf.a
depbase=`echo ctest64.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../nc_test -I../libsrc -I../libsrc -m32 -MT ctest64.o -MD -MP -MF $depbase.Tpo -c -o ctest64.o ctest64.c &&\
mv -f $depbase.Tpo $depbase.Po
/bin/sh ../libtool --tag=CC --mode=link cc -m32 -o ctest64 ctest64.o -lm ../libsrc/libnetcdf.la
libtool: link: cc -m32 -o ctest64 ctest64.o -lm ../libsrc/.libs/libnetcdf.a
make[3]: `ncdump' is up to date.
depbase=`echo tst_utf8.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../nc_test -I../libsrc -I../libsrc -m32 -MT tst_utf8.o -MD -MP -MF $depbase.Tpo -c -o tst_utf8.o tst_utf8.c &&\
mv -f $depbase.Tpo $depbase.Po
/bin/sh ../libtool --tag=CC --mode=link cc -m32 -o tst_utf8 tst_utf8.o -lm ../libsrc/libnetcdf.la
libtool: link: cc -m32 -o tst_utf8 tst_utf8.o -lm ../libsrc/.libs/libnetcdf.a
make check-TESTS

*** Testing ncgen and ncdump using some test CDL files.
*** creating tst_small.nc from ref_tst_small.cdl...
*** creating tst_small.cdl from tst_small.nc...
*** creating test0.nc from test0.cdl...
*** creating test1.cdl from test0.nc...
*** creating test1.nc from test1.cdl...
*** creating test2.cdl from test1.nc...
*** checking that test1.cdl and test2.nc are the same...
*** All tests of ncgen and ncdump using test0.cdl passed!
PASS: run_tests.sh

*** Testing ncgen and ncdump with 64-bit offset format.
*** creating test0.nc from test0.cdl...
*** creating test1.cdl from test0.nc...
*** creating test1.nc from test1.cdl...
*** creating test2.cdl from test1.nc...
*** All ncgen and ncdump with 64-bit offset format tests passed!
PASS: tst_64bit.sh
PASS: ctest
PASS: ctest64

*** Testing ncgen and ncdump test output for classic format.
*** creating ctest1.cdl from ctest0.nc...
*** creating c0.nc from c0.cdl...
*** creating c1.cdl from c0.nc...
*** comparing ncdump of C program output (ctest1.cdl) with c1.cdl...
*** test output for ncdump -k
*** test output for ncdump -x
*** creating tst_ncml.nc from tst_ncml.cdl
*** creating c1.ncml from tst_ncml.nc
*** comparing ncdump -x of generated file with ref1.ncml ...
*** All ncgen and ncdump test output for classic format passed!
*** Testing ncgen and ncdump test output for 64-bit offset format.
*** creating ctest1.cdl from test0_64.nc...
*** creating c0.nc from c0.cdl...
*** creating c1.cdl from c0.nc...
*** comparing ncdump of C program output (ctest1_64.cdl) with c1.cdl...
*** test output for ncdump -k
*** All ncgen and ncdump test output for 64-bit offset format passed!
PASS: tst_output.sh
*** testing length of classic file
*** testing length of classic file written with NOFILL
*** testing length of rewritten classic file
*** testing length of rewritten classic file written with NOFILL
*** testing length of 64-bit offset file
*** testing length of 64-bit offset file written with NOFILL
*** testing length of rewritten 64-bit offset file
*** testing length of rewritten 64-bit offset file written with NOFILL
*** testing length of one-record-variable classic file
*** testing length of one-record-variable classic file written with NOFILL
*** testing length of one-record-variable 64-bit offset file
*** testing length of one-record-variable 64-bit offset file written with NOFILL
PASS: tst_lengths.sh
*** creating UTF-8 test file tst_utf8.nc...ok.
*** Tests successful!
PASS: tst_utf8

*** Testing ncgen and ncdump for UTF8 support...
*** creating classic offset file with utf8 characters...
*** dump and compare utf8 output...
*** creating 64-bit offset file with utf8 characters...
*** (64 bit) dump and compare utf8 output...
*** dumping tst_utf8.nc to tst_utf8.cdl...
*** comparing tst_utf8.cdl with tst8.cdl...
*** All utf8 tests of ncgen and ncdump passed!
PASS: run_utf8_tests.sh
==================
All 8 tests passed
==================
Making check in nf_test
make nf_test tst_f77_v2 ftest tst_f90
gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../fortran -I../libsrc -I../fortran -I../f90 -O3 -c -o test_get.o test_get.F
gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../fortran -I../libsrc -I../fortran -I../f90 -O3 -c -o test_put.o test_put.F
gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../fortran -I../libsrc -I../fortran -I../f90 -O3 -c -o nf_error.o nf_error.F
gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../fortran -I../libsrc -I../fortran -I../f90 -O3 -c -o nf_test.o nf_test.F
gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../fortran -I../libsrc -I../fortran -I../f90 -O3 -c -o test_read.o test_read.F
gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../fortran -I../libsrc -I../fortran -I../f90 -O3 -c -o test_write.o test_write.F
gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../fortran -I../libsrc -I../fortran -I../f90 -O3 -c -o util.o util.F
depbase=`echo fortlib.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -m32 -MT fortlib.o -MD -MP -MF $depbase.Tpo -c -o fortlib.o fortlib.c &&\
mv -f $depbase.Tpo $depbase.Po
/bin/sh ../libtool --tag=F77 --mode=link gfortran -I../fortran -I../libsrc -I../fortran -I../f90 -O3 -o nf_test test_get.o test_put.o nf_error.o nf_test.o test_read.o test_write.o util.o fortlib.o ../libsrc/libnetcdf.la
libtool: link: gfortran -I../fortran -I../libsrc -I../fortran -I../f90 -O3 -o nf_test test_get.o test_put.o nf_error.o nf_test.o test_read.o test_write.o util.o fortlib.o ../libsrc/.libs/libnetcdf.a
gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../fortran -I../libsrc -I../fortran -I../f90 -O3 -c -o tst_f77_v2.o tst_f77_v2.F
/bin/sh ../libtool --tag=F77 --mode=link gfortran -I../fortran -I../libsrc -I../fortran -I../f90 -O3 -o tst_f77_v2 tst_f77_v2.o ../libsrc/libnetcdf.la
libtool: link: gfortran -I../fortran -I../libsrc -I../fortran -I../f90 -O3 -o tst_f77_v2 tst_f77_v2.o ../libsrc/.libs/libnetcdf.a
gfortran -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../fortran -I../libsrc -I../fortran -I../f90 -O3 -c -o ftest.o ftest.F
/bin/sh ../libtool --tag=F77 --mode=link gfortran -I../fortran -I../libsrc -I../fortran -I../f90 -O3 -o ftest ftest.o fortlib.o ../libsrc/libnetcdf.la
libtool: link: gfortran -I../fortran -I../libsrc -I../fortran -I../f90 -O3 -o ftest ftest.o fortlib.o ../libsrc/.libs/libnetcdf.a
gfortran -I../fortran -I../f90 -I../libsrc -I../fortran -I../f90 -g -O2 -c -o tst_f90.o tst_f90.f90
/bin/sh ../libtool --mode=link gfortran -I../fortran -I../f90 -I../libsrc -I../fortran -I../f90 -g -O2 -o tst_f90 tst_f90.o ../libsrc/libnetcdf.la
libtool: link: gfortran -I../fortran -I../f90 -I../libsrc -I../fortran -I../f90 -g -O2 -o tst_f90 tst_f90.o ../libsrc/.libs/libnetcdf.a
make check-TESTS
*** Creating fills.nc.
*** SUCCESS!
PASS: create_fills.sh
*** Testing netCDF-3 Fortran 77 API.
NetCDF version: "3.6.3" of Jul 30 2011 14:19:35 $
*** testing nf_strerror ...
*** testing nf_open ...
*** testing nf_close ...
*** testing nf_inq ...
*** testing nf_inq_dimid ...
*** testing nf_inq_dim ...
*** testing nf_inq_dimlen ...
*** testing nf_inq_dimname ...
*** testing nf_inq_varid ...
*** testing nf_inq_var ...
*** testing nf_inq_natts ...
*** testing nf_inq_ndims ...
*** testing nf_inq_nvars ...
*** testing nf_inq_unlimdim ...
*** testing nf_inq_format ...
*** testing nf_inq_vardimid ...
*** testing nf_inq_varname ...
*** testing nf_inq_varnatts ...
*** testing nf_inq_varndims ...
*** testing nf_inq_vartype ...
*** testing nf_get_var1_text ...
*** testing nf_get_var1_int1 ...
*** testing nf_get_var1_int2 ...
*** testing nf_get_var1_int ...
*** testing nf_get_var1_real ...
*** testing nf_get_var1_double ...
*** testing nf_get_var_text ...
*** testing nf_get_var_int1 ...
*** testing nf_get_var_int2 ...
*** testing nf_get_var_int ...
*** testing nf_get_var_real ...
*** testing nf_get_var_double ...
*** testing nf_get_vara_text ...
*** testing nf_get_vara_int1 ...
*** testing nf_get_vara_int2 ...
*** testing nf_get_vara_int ...
*** testing nf_get_vara_real ...
*** testing nf_get_vara_double ...
*** testing nf_get_vars_text ...
*** testing nf_get_vars_int1 ...
*** testing nf_get_vars_int2 ...
*** testing nf_get_vars_int ...
*** testing nf_get_vars_real ...
*** testing nf_get_vars_double ...
*** testing nf_get_varm_text ...
*** testing nf_get_varm_int1 ...
*** testing nf_get_varm_int2 ...
*** testing nf_get_varm_int ...
*** testing nf_get_varm_real ...
*** testing nf_get_varm_double ...
*** testing nf_get_att_text ...
*** testing nf_get_att_int1 ...
*** testing nf_get_att_int2 ...
*** testing nf_get_att_int ...
*** testing nf_get_att_real ...
*** testing nf_get_att_double ...
*** testing nf_inq_att ...
*** testing nf_inq_attname ...
*** testing nf_inq_attid ...
*** testing nf_inq_attlen ...
*** testing nf_inq_atttype ...
*** testing nf_create ...
*** testing nf_redef ...
*** testing nf_enddef ...
*** testing nf_sync ...
*** testing nf_abort ...
*** testing nf_def_dim ...
*** testing nf_rename_dim ...
*** testing nf_def_var ...
*** testing nf_put_var1_text ...
*** testing nf_put_var1_int1 ...
*** testing nf_put_var1_int2 ...
*** testing nf_put_var1_int ...
*** testing nf_put_var1_real ...
*** testing nf_put_var1_double ...
*** testing nf_put_var_text ...
*** testing nf_put_var_int1 ...
*** testing nf_put_var_int2 ...
*** testing nf_put_var_int ...
*** testing nf_put_var_real ...
*** testing nf_put_var_double ...
*** testing nf_put_vara_text ...
*** testing nf_put_vara_int1 ...
*** testing nf_put_vara_int2 ...
*** testing nf_put_vara_int ...
*** testing nf_put_vara_real ...
*** testing nf_put_vara_double ...
*** testing nf_put_vars_text ...
*** testing nf_put_vars_int1 ...
*** testing nf_put_vars_int2 ...
*** testing nf_put_vars_int ...
*** testing nf_put_vars_real ...
*** testing nf_put_vars_double ...
*** testing nf_put_varm_text ...
*** testing nf_put_varm_int1 ...
*** testing nf_put_varm_int2 ...
*** testing nf_put_varm_int ...
*** testing nf_put_varm_real ...
*** testing nf_put_varm_double ...
*** testing nf_rename_var ...
*** testing nf_put_att_text ...
*** testing nf_put_att_int1 ...
*** testing nf_put_att_int2 ...
*** testing nf_put_att_int ...
*** testing nf_put_att_real ...
*** testing nf_put_att_double ...
*** testing nf_copy_att ...
*** testing nf_rename_att ...
*** testing nf_del_att ...
*** testing nf_set_fill ...
*** testing nf_set_default_format ...
Total number of failures: 0
*** SUCCESS!
PASS: nf_test
PASS: tst_f77_v2
*** Testing netCDF-2 Fortran 77 API.
*** testing nccre ...
*** testing ncddef ...
*** testing ncvdef ...
*** testing ncapt, ncaptc ...
*** testing ncclos ...
*** testing ncvpt1 ...
*** testing ncvgt1 ...
*** testing ncvpt ...
*** testing ncopn, ncinq, ncdinq, ncvinq, ncanam, ncainq ...
*** testing ncvgt, ncvgtc ...
*** testing ncagt, ncagtc ...
*** testing ncredf, ncdren, ncvren, ncaren, ncendf ...
*** testing ncacpy ...
*** testing ncadel ...
*** testing fill values ...
Total number of failures: 0
*** SUCCESS!
PASS: ftest
*** Testing netCDF-3 Fortran 90 API.
*** SUCCESS!
PASS: tst_f90
==================
All 5 tests passed
==================
Making check in cxx
make nctst tst_failure
depbase=`echo nctst.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
g++ -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../libsrc -g -O2 -MT nctst.o -MD -MP -MF $depbase.Tpo -c -o nctst.o nctst.cpp &&\
mv -f $depbase.Tpo $depbase.Po
/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -o nctst nctst.o ../cxx/libnetcdf_c++.la ../libsrc/libnetcdf.la
libtool: link: g++ -g -O2 -o nctst nctst.o -Wl,-bind_at_load ../cxx/.libs/libnetcdf_c++.a ../libsrc/.libs/libnetcdf.a
ld: warning: in ../libsrc/.libs/libnetcdf.a, file was built for unsupported file format which is not the architecture being linked (x86_64)
Undefined symbols:
"_nc_put_vara_short", referenced from:
NcVar::put(short const*, long const*)in libnetcdf_c++.a(netcdf.o)
NcVar::put(short const*, long, long, long, long, long)in libnetcdf_c++.a(netcdf.o)
"_nc_get_vara_text", referenced from:
NcVar::get(char*, long const*) constin libnetcdf_c++.a(netcdf.o)
NcVar::get(char*, long, long, long, long, long) constin libnetcdf_c++.a(netcdf.o)
NcVar::values() constin libnetcdf_c++.a(netcdf.o)
NcVar::get_rec(NcDim*, long)in libnetcdf_c++.a(netcdf.o)
"_nc_inq_dimname", referenced from:
NcDim::NcDim(NcFile*, int)in libnetcdf_c++.a(netcdf.o)
NcDim::sync() in libnetcdf_c++.a(netcdf.o)
"_nc_get_vara_int", referenced from:
NcVar::get(int*, long const*) constin libnetcdf_c++.a(netcdf.o)
NcVar::get(int*, long, long, long, long, long) constin libnetcdf_c++.a(netcdf.o)
NcVar::values() constin libnetcdf_c++.a(netcdf.o)
NcVar::get_rec(NcDim*, long)in libnetcdf_c++.a(netcdf.o)
"_nc_get_att_float", referenced from:
NcAtt::values() constin libnetcdf_c++.a(netcdf.o)
"_nc_get_att_short", referenced from:
NcAtt::values() constin libnetcdf_c++.a(netcdf.o)
"_nc_inq_vartype", referenced from:
NcVar::type() constin libnetcdf_c++.a(netcdf.o)
"_nc__open", referenced from:
NcFile::NcFile(char const*, NcFile::FileMode, unsigned long*, unsigned long, NcFile::FileFormat)in libnetcdf_c++.a(netcdf.o)
"_nc_inq_nvars", referenced from:
NcFile::num_vars() constin libnetcdf_c++.a(netcdf.o)
"_nc_inq_varnatts", referenced from:
NcVar::num_atts() constin libnetcdf_c++.a(netcdf.o)
"_nc_put_vara_long", referenced from:
NcVar::put(long const*, long const*)in libnetcdf_c++.a(netcdf.o)
NcVar::put(long const*, long, long, long, long, long)in libnetcdf_c++.a(netcdf.o)
"_nc_put_att_schar", referenced from:
NcVar::add_att(char const*, int, signed char const*)in libnetcdf_c++.a(netcdf.o)
NcVar::add_att(char const*, signed char)in libnetcdf_c++.a(netcdf.o)
"_nc_inq_dimid", referenced from:
NcFile::get_dim(char const*) constin libnetcdf_c++.a(netcdf.o)
"_nc_inq_atttype", referenced from:
NcAtt::type() constin libnetcdf_c++.a(netcdf.o)
"_nc_put_att_double", referenced from:
NcVar::add_att(char const*, int, double const*)in libnetcdf_c++.a(netcdf.o)
NcVar::add_att(char const*, double)in libnetcdf_c++.a(netcdf.o)
"_nc_inq_varndims", referenced from:
NcVar::num_dims() constin libnetcdf_c++.a(netcdf.o)
"_nc_get_vara_double", referenced from:
NcVar::get(double*, long const*) constin libnetcdf_c++.a(netcdf.o)
NcVar::get(double*, long, long, long, long, long) constin libnetcdf_c++.a(netcdf.o)
NcVar::values() constin libnetcdf_c++.a(netcdf.o)
NcVar::get_rec(NcDim*, long)in libnetcdf_c++.a(netcdf.o)
"_nc_put_vara_text", referenced from:
NcVar::put(char const*, long const*)in libnetcdf_c++.a(netcdf.o)
NcVar::put(char const*, long, long, long, long, long)in libnetcdf_c++.a(netcdf.o)
"_nc_inq_varname", referenced from:
NcVar::NcVar(NcFile*, int)in libnetcdf_c++.a(netcdf.o)
NcVar::sync() in libnetcdf_c++.a(netcdf.o)
"_nc_put_vara_double", referenced from:
NcVar::put(double const*, long const*)in libnetcdf_c++.a(netcdf.o)
NcVar::put(double const*, long, long, long, long, long)in libnetcdf_c++.a(netcdf.o)
"_nc_sync", referenced from:
NcFile::sync() in libnetcdf_c++.a(netcdf.o)
"_nc_put_att_float", referenced from:
NcVar::add_att(char const*, int, float const*)in libnetcdf_c++.a(netcdf.o)
NcVar::add_att(char const*, float)in libnetcdf_c++.a(netcdf.o)
"_nc_inq_format", referenced from:
NcFile::get_format() const in libnetcdf_c++.a(netcdf.o)
"_nc_strerror", referenced from:
NcError::set_err(int) in libnetcdf_c++.a(netcdf.o)
"_nc_put_att_short", referenced from:
NcVar::add_att(char const*, int, short const*)in libnetcdf_c++.a(netcdf.o)
NcVar::add_att(char const*, short)in libnetcdf_c++.a(netcdf.o)
"_nc_inq_natts", referenced from:
NcFile::num_atts() constin libnetcdf_c++.a(netcdf.o)
"_nc_def_var", referenced from:
NcFile::add_var(char const*, NcType, int, NcDim const**)in libnetcdf_c++.a(netcdf.o)
NcFile::add_var(char const*, NcType, NcDim const*, NcDim const*, NcDim const*, NcDim const*, NcDim const*)in libnetcdf_c++.a(netcdf.o)
"_nc_inq_attlen", referenced from:
NcAtt::num_vals() constin libnetcdf_c++.a(netcdf.o)
"_nc_get_vara_schar", referenced from:
NcVar::get(signed char*, long const*) constin libnetcdf_c++.a(netcdf.o)
NcVar::get(signed char*, long, long, long, long, long) constin libnetcdf_c++.a(netcdf.o)
NcVar::values() constin libnetcdf_c++.a(netcdf.o)
NcVar::get_rec(NcDim*, long)in libnetcdf_c++.a(netcdf.o)
"_nc_inq_ndims", referenced from:
NcFile::num_dims() constin libnetcdf_c++.a(netcdf.o)
"_nc_inq_attname", referenced from:
NcVar::attname(int) constin libnetcdf_c++.a(netcdf.o)
NcVar::attnum(char const*) constin libnetcdf_c++.a(netcdf.o)
"_nc_rename_var", referenced from:
NcVar::rename(char const*)in libnetcdf_c++.a(netcdf.o)
"_nc_inq_var", referenced from:
NcVar::get_dim(int) constin libnetcdf_c++.a(netcdf.o)
"_nc_get_att_text", referenced from:
NcAtt::values() constin libnetcdf_c++.a(netcdf.o)
"_nc_put_vara_int", referenced from:
NcVar::put(int const*, long const*)in libnetcdf_c++.a(netcdf.o)
NcVar::put(int const*, long, long, long, long, long)in libnetcdf_c++.a(netcdf.o)
"_nc_inq_dimlen", referenced from:
NcDim::size() constin libnetcdf_c++.a(netcdf.o)
"_nc_enddef", referenced from:
NcFile::data_mode() in libnetcdf_c++.a(netcdf.o)
"_nc_get_att_int", referenced from:
NcAtt::values() constin libnetcdf_c++.a(netcdf.o)
"_nc_get_vara_float", referenced from:
NcVar::get(float*, long const*) constin libnetcdf_c++.a(netcdf.o)
NcVar::get(float*, long, long, long, long, long) constin libnetcdf_c++.a(netcdf.o)
NcVar::values() constin libnetcdf_c++.a(netcdf.o)
NcVar::get_rec(NcDim*, long)in libnetcdf_c++.a(netcdf.o)
"_nc_redef", referenced from:
NcFile::define_mode() in libnetcdf_c++.a(netcdf.o)
"_nc_set_fill", referenced from:
NcFile::set_fill(NcFile::FillMode) in libnetcdf_c++.a(netcdf.o)
"_nc_get_vara_short", referenced from:
NcVar::get(short*, long const*) constin libnetcdf_c++.a(netcdf.o)
NcVar::get(short*, long, long, long, long, long) constin libnetcdf_c++.a(netcdf.o)
NcVar::values() constin libnetcdf_c++.a(netcdf.o)
NcVar::get_rec(NcDim*, long)in libnetcdf_c++.a(netcdf.o)
"_nc_inq_unlimdim", referenced from:
NcDim::is_unlimited() const in libnetcdf_c++.a(netcdf.o)
NcFile::rec_dim() constin libnetcdf_c++.a(netcdf.o)
"_nc_del_att", referenced from:
NcAtt::remove() in libnetcdf_c++.a(netcdf.o)
"_nc_inq_varid", referenced from:
NcFile::get_var(char const*) constin libnetcdf_c++.a(netcdf.o)
"_nc_abort", referenced from:
NcFile::abort() in libnetcdf_c++.a(netcdf.o)
"_nc_inq_attid", referenced from:
NcAtt::is_valid() constin libnetcdf_c++.a(netcdf.o)
"_nc__create", referenced from:
NcFile::NcFile(char const*, NcFile::FileMode, unsigned long*, unsigned long, NcFile::FileFormat)in libnetcdf_c++.a(netcdf.o)
"_nc_put_att_int", referenced from:
NcVar::add_att(char const*, int, int const*)in libnetcdf_c++.a(netcdf.o)
NcVar::add_att(char const*, int)in libnetcdf_c++.a(netcdf.o)
"_nc_put_vara_schar", referenced from:
NcVar::put(signed char const*, long const*)in libnetcdf_c++.a(netcdf.o)
NcVar::put(signed char const*, long, long, long, long, long)in libnetcdf_c++.a(netcdf.o)
"_nc_def_dim", referenced from:
NcDim::NcDim(NcFile*, char const*, long)in libnetcdf_c++.a(netcdf.o)
"_nc_get_att_double", referenced from:
NcAtt::values() constin libnetcdf_c++.a(netcdf.o)
"_nc_put_att_long", referenced from:
NcVar::add_att(char const*, int, long const*)in libnetcdf_c++.a(netcdf.o)
NcVar::add_att(char const*, long)in libnetcdf_c++.a(netcdf.o)
"_nc_rename_att", referenced from:
NcAtt::rename(char const*)in libnetcdf_c++.a(netcdf.o)
"_nc_rename_dim", referenced from:
NcDim::rename(char const*)in libnetcdf_c++.a(netcdf.o)
"_nc_get_vara_long", referenced from:
NcVar::get(long*, long const*) constin libnetcdf_c++.a(netcdf.o)
NcVar::get(long*, long, long, long, long, long) constin libnetcdf_c++.a(netcdf.o)
"_nc_get_att_schar", referenced from:
NcAtt::values() constin libnetcdf_c++.a(netcdf.o)
"_nc_put_att_text", referenced from:
NcVar::add_att(char const*, int, char const*)in libnetcdf_c++.a(netcdf.o)
NcVar::add_att(char const*, char const*)in libnetcdf_c++.a(netcdf.o)
NcVar::add_att(char const*, char)in libnetcdf_c++.a(netcdf.o)
"_nc_put_vara_float", referenced from:
NcVar::put(float const*, long const*)in libnetcdf_c++.a(netcdf.o)
NcVar::put(float const*, long, long, long, long, long)in libnetcdf_c++.a(netcdf.o)
"_nc_close", referenced from:
NcFile::close() in libnetcdf_c++.a(netcdf.o)
ld: symbol(s) not found
collect2: ld returned 1 exit status
make[2]: *** [nctst] Error 1
make[1]: *** [check-am] Error 2
make: *** [check-recursive] Error 1
Leifs-Computer:netcdf-3.6.3 lrasmuson$


Thanks for any help,
Leif
Top
jpringle
Posts: 108
Joined: Sun Jul 27, 2003 6:49 pm
Location: UNH, USA

Re: Netcdf 3.6.3 problem

#2 Unread post by jpringle »

Dear Linda--

It appears that it passes the fortran tests, and fails the C++ tests. Since you only need the fortran libraries for ROMS, it seems like you should be good to go once you install it.

Cheers,
Jamie Pringle
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User avatar
m.hadfield
Posts: 521
Joined: Tue Jul 01, 2003 4:12 am
Location: NIWA

Re: Netcdf 3.6.3 problem

#3 Unread post by m.hadfield »

Or if you're the sort of person who finds failed tests troubling, you could rebuild it without C++ support, using the --disable-cxx switch. From the INSTALL file:

Code: Select all

`--disable-cxx'
     This turns off the building of the C++ API. Setting the environment
     variable CXX to null for configure will have the same effect.
Top
LRasmuson
Posts: 9
Joined: Mon Feb 28, 2011 5:48 pm
Location: Oregon Institute of Marine Biology

Re: Netcdf 3.6.3 problem

#4 Unread post by LRasmuson »

Thanks for the help. I went ahead and just didn't worry about it failing the C++ tests and after I modified the make files to direct to where I installed Netcdf I executed make and all seemed to go well until the end when I received the following string

Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs rx0:G(0,3) in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs r0:G(0,158)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs r_text:G(0,159)=@S;ar(0,2);1;19;(0,160)=@s8;r(0,160);0;255; in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs r_date:G(0,161)=ar(0,2);0;7;(0,3) in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs rdrg2:G(0,162)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs rdrg:G(0,163)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs run_time:G(0,3) in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs rho0:G(0,3) in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs rhow:G(0,3) in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs rx1:G(0,3) in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs scoef:G(0,164)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs scalars:G(0,165)=xsarray1_t_scalars: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs so_decay:G(0,166)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs sfcount:G(0,167)=xsarray1_int4: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs so_sdev:G(0,168)=xsarray2_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs sorec:G(0,169)=xsarray1_int4: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs spherical:G(0,14) in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs t0:G(0,170)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs stefbo:G(0,3) in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs sz_alpha:G(0,171)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs synchro_flag:G(0,172)=xsarray1_logical4: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs tl_visc4:G(0,173)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs tcline:G(0,174)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs tl_tdiff:G(0,175)=xsarray2_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs theta_s:G(0,176)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs tcoef:G(0,177)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs theta_b:G(0,178)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs tdays:G(0,179)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs tl_akv_fac:G(0,180)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs tide_start:G(0,3) in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs time:G(0,181)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs timeend:G(0,182)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs time_code:G(0,183)=xsarray1_unknown: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs time_ref:G(0,3) in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs tl_akt_fac:G(0,184)=xsarray2_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs tkenu2:G(0,185)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs tkenu4:G(0,186)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs tl_m2diff:G(0,187)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs tl_m3diff:G(0,188)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs tl_tnu2:G(0,189)=xsarray2_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs tl_visc2:G(0,190)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs tl_tnu4:G(0,191)=xsarray2_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs tobc_in:G(0,192)=xsarray3_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs tnu2:G(0,193)=xsarray2_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs tlmodel:G(0,14) in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs tnu4:G(0,194)=xsarray2_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs tnudg:G(0,195)=xsarray2_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs weight:G(0,196)=xsarray3_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs ubar_xs:G(0,3) in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs tobc_out:G(0,197)=xsarray3_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs totvolume:G(0,3) in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs trnorm:G(0,198)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs vstretching:G(0,199)=xsarray1_int4: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs visc2:G(0,200)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs user:G(0,201)=ar(0,2);0;24;(0,3) in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs visc4:G(0,202)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs volume:G(0,3) in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs vonkar:G(0,3) in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs vtransform:G(0,203)=xsarray1_int4: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs zos:G(0,204)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs xl:G(0,205)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs znudg:G(0,206)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs zob:G(0,207)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs zos_hsig_alpha:G(0,208)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs ncs:G(0,2) in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs domain:G(0,3)=xsarray1_t_domain: in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs bounds:G(0,4)=xsarray1_t_bounds: in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs halosizej:G(0,5)=xsarray1_int4: in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs halosizei:G(0,6)=xsarray1_int4: in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs im:G(0,7)=xsarray1_int4: in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs iadm:G(0,2) in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs jm:G(0,8)=xsarray1_int4: in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs iobounds:G(0,9)=xsarray1_t_iobounds: in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs inlm:G(0,2) in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs irpm:G(0,2) in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs itlm:G(0,2) in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs mt:G(0,2) in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs lm:G(0,10)=xsarray1_int4: in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs mm:G(0,11)=xsarray1_int4: in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs mtc:G(0,2) in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs nbt:G(0,2) in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs nbed:G(0,2) in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs n:G(0,12)=xsarray1_int4: in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs nat:G(0,2) in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs tilesize:G(0,13)=xsarray1_int4: in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs ndm3d:G(0,2) in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs ndbio2d:G(0,2) in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs ndm2d:G(0,2) in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs ndbio3d:G(0,2) in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs npt:G(0,2) in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs nghostpoints:G(0,2) in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs ndrhs:G(0,2) in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs ndt:G(0,2) in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs nns:G(0,2) in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs ngrids:G(0,2) in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs nsv:G(0,14)=xsarray1_int4: in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs nst:G(0,2) in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs ntilex:G(0,15)=xsarray1_int4: in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs nt:G(0,16)=xsarray1_int4: in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs ntilee:G(0,17)=xsarray1_int4: in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs ntilej:G(0,18)=xsarray1_int4: in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs ntilei:G(0,19)=xsarray1_int4: in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs tileside:G(0,20)=xsarray1_int4: in Build/libMODS.a(mod_param.o)
ld: warning: can't find atom for N_GSYM stabs block_count:G(0,2)=r(0,2);-2147483648;2147483647; in Build/libMODS.a(mod_parallel.o)
ld: warning: can't find atom for N_GSYM stabs cstr:G(0,3)=xsarray3_real8: in Build/libMODS.a(mod_parallel.o)
ld: warning: can't find atom for N_GSYM stabs cend:G(0,4)=xsarray3_real8: in Build/libMODS.a(mod_parallel.o)
ld: warning: can't find atom for N_GSYM stabs csum:G(0,5)=xsarray3_real8: in Build/libMODS.a(mod_parallel.o)
ld: warning: can't find atom for N_GSYM stabs inpthread:G(0,6)=@s32;-16; in Build/libMODS.a(mod_parallel.o)
ld: warning: can't find atom for N_GSYM stabs master:G(0,6) in Build/libMODS.a(mod_parallel.o)
ld: warning: can't find atom for N_GSYM stabs myrank:G(0,2) in Build/libMODS.a(mod_parallel.o)
ld: warning: can't find atom for N_GSYM stabs numnodes:G(0,2) in Build/libMODS.a(mod_parallel.o)
ld: warning: can't find atom for N_GSYM stabs proc:G(0,7)=xsarray3_int4: in Build/libMODS.a(mod_parallel.o)
ld: warning: can't find atom for N_GSYM stabs outthread:G(0,6) in Build/libMODS.a(mod_parallel.o)
ld: warning: can't find atom for N_GSYM stabs numthreads:G(0,2) in Build/libMODS.a(mod_parallel.o)
ld: warning: can't find atom for N_GSYM stabs peocn_frst:G(0,2) in Build/libMODS.a(mod_parallel.o)
ld: warning: can't find atom for N_GSYM stabs peocn_last:G(0,2) in Build/libMODS.a(mod_parallel.o)
ld: warning: can't find atom for N_GSYM stabs tile_count:G(0,2) in Build/libMODS.a(mod_parallel.o)
ld: warning: can't find atom for N_GSYM stabs thread_count:G(0,2) in Build/libMODS.a(mod_parallel.o)
ld: warning: can't find atom for N_GSYM stabs ads:G(0,2)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs adm:G(0,3)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs aparnam:G(0,4)=@S;ar(0,5)=r(0,5);-2147483648;2147483647;;1;256;(0,6)=@s8;r(0,6);0;255; in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs avg:G(0,7)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs blk:G(0,8)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs bry:G(0,9)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs bparnam:G(0,4) in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs clm:G(0,10)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs err:G(0,11)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs dia:G(0,12)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs dav:G(0,13)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs gst:G(0,14)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs grd:G(0,15)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs fwd:G(0,16)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs fposnam:G(0,4) in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs flt:G(0,17)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs frcids:G(0,18)=xsarray2_int4: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs frc:G(0,19)=xsarray2_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs hss:G(0,20)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs his:G(0,21)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs iname:G(0,4) in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs iad:G(0,22)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs irp:G(0,23)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs ini:G(0,24)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs ioerror:G(0,5) in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs itl:G(0,25)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs myappcpp:G(0,4) in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs lcz:G(0,26)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs ncfile:G(0,4) in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs nffiles:G(0,27)=xsarray1_int4: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs nrm:G(0,28)=xsarray2_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs obs:G(0,29)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs rerror:G(0,30)=ar(0,5);0;7;(0,31)=@S;ar(0,5);1;50;(0,6) in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs rst:G(0,32)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs std:G(0,33)=xsarray2_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs sparnam:G(0,4) in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs sourcefile:G(0,4) in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs sta:G(0,34)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs sposnam:G(0,4) in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs tlm:G(0,35)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs tide:G(0,36)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs tlf:G(0,37)=xsarray1_t_io: in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs wname:G(0,4) in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs varname:G(0,4) in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs usrname:G(0,4) in Build/libMODS.a(mod_iounits.o)
ld: warning: can't find atom for N_GSYM stabs lold:G(0,3)=xsarray1_int4: in Build/libMODS.a(mod_stepping.o)
ld: warning: can't find atom for N_GSYM stabs kstp:G(0,4)=xsarray1_int4: in Build/libMODS.a(mod_stepping.o)
ld: warning: can't find atom for N_GSYM stabs krhs:G(0,5)=xsarray1_int4: in Build/libMODS.a(mod_stepping.o)
ld: warning: can't find atom for N_GSYM stabs knew:G(0,6)=xsarray1_int4: in Build/libMODS.a(mod_stepping.o)
ld: warning: can't find atom for N_GSYM stabs lnew:G(0,7)=xsarray1_int4: in Build/libMODS.a(mod_stepping.o)
ld: warning: can't find atom for N_GSYM stabs nnew:G(0,8)=xsarray1_int4: in Build/libMODS.a(mod_stepping.o)
ld: warning: can't find atom for N_GSYM stabs nrhs:G(0,9)=xsarray1_int4: in Build/libMODS.a(mod_stepping.o)
ld: warning: can't find atom for N_GSYM stabs nstp:G(0,10)=xsarray1_int4: in Build/libMODS.a(mod_stepping.o)
ld: warning: can't find atom for N_GSYM stabs pregion:G(0,1)=ar(0,2)=r(0,2);-2147483648;2147483647;;0;47;(0,3)=@S;ar(0,2);1;50;(0,4)=@s8;r(0,4);0;255; in Build/libMODS.a(mod_strings.o)
ld: warning: can't find atom for N_GSYM stabs my_fc:G(0,5)=@S;ar(0,2);1;80;(0,4) in Build/libMODS.a(mod_strings.o)
ld: warning: can't find atom for N_GSYM stabs coptions:G(0,6)=@S;ar(0,2);1;2048;(0,4) in Build/libMODS.a(mod_strings.o)
ld: warning: can't find atom for N_GSYM stabs my_cpu:G(0,5) in Build/libMODS.a(mod_strings.o)
ld: warning: can't find atom for N_GSYM stabs my_fflags:G(0,7)=@S;ar(0,2);1;160;(0,4) in Build/libMODS.a(mod_strings.o)
ld: warning: can't find atom for N_GSYM stabs my_fort:G(0,5) in Build/libMODS.a(mod_strings.o)
ld: warning: can't find atom for N_GSYM stabs my_os:G(0,5) in Build/libMODS.a(mod_strings.o)
ld: warning: can't find atom for N_GSYM stabs statemsg:G(0,8)=ar(0,2);0;11;(0,9)=@S;ar(0,2);1;55;(0,4) in Build/libMODS.a(mod_strings.o)
ld: warning: can't find atom for N_GSYM stabs title:G(0,5) in Build/libMODS.a(mod_strings.o)
ld: warning: can't find atom for N_GSYM stabs idempf:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs finfo:G(0,8)=xsarray3_real8: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs ananame:G(0,9)=ar(0,2);0;36;(0,10)=@S;ar(0,2);1;256;(0,7) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs adir:G(0,10) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs aout:G(0,11)=xsarray2_logical4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs dout:G(0,12)=xsarray2_logical4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs date_str:G(0,13)=@S;ar(0,2);1;44;(0,7) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs cinfo:G(0,14)=xsarray2_unknown: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs fpoint:G(0,15)=xsarray3_real8: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs fscale:G(0,16)=xsarray2_real8: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs hdir:G(0,10) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs hfile:G(0,10) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs hout:G(0,17)=xsarray2_logical4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs history:G(0,6) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs iddv2d:G(0,18)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idcos2:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idcfra:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs id2dpv:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs id3drv:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs id3dpv:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs id2drv:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idbath:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idaice:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs iddtrc:G(0,19)=xsarray2_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs iddano:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idcosw:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs iddiff:G(0,20)=ar(0,2);0;1;(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs iddpth:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs iddqdt:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs iddu3d:G(0,21)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs iddu2d:G(0,22)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idefavg:G(0,23)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idefadj:G(0,24)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs iddv3d:G(0,25)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs ideftlm:G(0,26)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idefhis:G(0,27)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idefdia:G(0,28)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idzzav:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvbed:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idusms:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs iduobs:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idsvar:G(0,29)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idsssc:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idnlmo:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idglat:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idghat:G(0,30)=ar(0,2);0;1;(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idfsur:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idevap:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idfsud:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idfsuh:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idhsbl:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idhbbl:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idglon:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idhice:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idldwn:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idhsno:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idhvav:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idhuav:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idkhor:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idkver:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idmomi:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idmomf:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idlhea:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idmadh:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idlrad:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idnlmi:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idmtls:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idmtke:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idrv3d:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idoday:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idobss:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idnobs:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idobsd:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idobsy:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idobsx:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idobst:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idobsz:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idoval:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idotyp:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idoerr:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idrv2d:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idpbar:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idpair:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idovar:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idovel:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idrepo:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idragq:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idragl:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idqair:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idrdir:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idrain:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idrtra:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idrflg:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idru2d:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idrtrc:G(0,31)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idruct:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idru3d:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idrvsh:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idrvct:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idshea:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idrwet:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idrxpo:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idrzet:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idsdif:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idsbry:G(0,32)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idsfwf:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idssho:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idsrad:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idsin2:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idsinw:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idsshc:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idsshe:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idsste:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idsstc:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idssto:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idtvma:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idtads:G(0,33)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idswcw:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idtsur:G(0,34)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idtice:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idtair:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idterr:G(0,35)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idtbot:G(0,36)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idtdif:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idtclm:G(0,37)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idtbry:G(0,38)=xsarray2_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idtper:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idtlmo:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idtime:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idtobs:G(0,39)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idtrcd:G(0,40)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idtrch:G(0,41)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idtvan:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idttlf:G(0,42)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idttav:G(0,43)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idtvar:G(0,44)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idubas:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idu3dh:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idu2rs:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idu2bc:G(0,45)=ar(0,2);0;3;(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idtzam:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idtvph:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idtvmi:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idtzph:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idu2av:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idu2dd:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idu2da:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idu2dh:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idu3dd:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idu2sd:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idu3bc:G(0,46)=ar(0,2);0;3;(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idu3sd:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idu3rs:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idubar:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs iduair:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs iduads:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idufx2:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idubcl:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idufx1:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idubms:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idubed:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idubcs:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idubws:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idubrs:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idubot:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idubur:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idubtf:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs iduclm:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs iduice:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idv3dh:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idv2rs:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idv2dd:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idv2bc:G(0,47)=ar(0,2);0;3;(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idv2av:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idutlf:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idusur:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idutav:G(0,48)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs iduvav:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs iduuav:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs iduvel:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs iduwet:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs iduver:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs iduvse:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idv2dh:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idv3dd:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idv2sd:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idv3bc:G(0,49)=ar(0,2);0;3;(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvair:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvads:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idv3sd:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idv3rs:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvbar:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvbcs:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvbas:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvbcl:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idworb:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvbms:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idw3zy:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idw2xx:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvbot:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvclm:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvbrs:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvbws:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvbvr:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvbtf:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvmkp:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvfx1:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvice:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvfx2:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvmkk:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvvav:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvsur:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvsms:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvmls:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvobs:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvtlf:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvtav:G(0,50)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvvel:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvwet:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idvvis:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idw3zx:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idw2xy:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idw3xy:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idw2yy:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idw3xx:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idw3yy:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idwamp:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idwdir:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idwbrk:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idwlen:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idwdis:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idwptp:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idwpbt:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idztlf:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idygrd:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idwvel:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idxgrd:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idzobl:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idzgrd:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idzbry:G(0,51)=ar(0,2);0;3;(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs idzads:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs isvbar:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs iinfo:G(0,52)=xsarray3_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs ihvtav:G(0,53)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs ihutav:G(0,54)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs istsur:G(0,55)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs isfsur:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs isuvel:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs isubar:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs istvar:G(0,56)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs isustr:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs rymax:G(0,57)=xsarray1_real8: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs linfo:G(0,58)=xsarray3_logical4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs isvstr:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs isvvel:G(0,2) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs lanafile:G(0,3) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs ncfrcid:G(0,59)=xsarray2_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs rxmax:G(0,60)=xsarray1_real8: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs nwateru:G(0,61)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs nwaterr:G(0,62)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs nxyv:G(0,63)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs nxyu:G(0,64)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs nxyr:G(0,65)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs nxyp:G(0,66)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs nwaterv:G(0,67)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs rjlb:G(0,68)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs riub:G(0,69)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs rdir:G(0,10) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs rilb:G(0,70)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs rjub:G(0,71)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs rxmin:G(0,72)=xsarray1_real8: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs svn_rev:G(0,73)=@S;ar(0,2);1;40;(0,7) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs rymin:G(0,74)=xsarray1_real8: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs sout:G(0,75)=xsarray2_logical4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs svn_url:G(0,10) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs tname:G(0,76)=ar(0,2);0;800;(0,77)=@S;ar(0,2);1;46;(0,7) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs tintrp:G(0,78)=xsarray3_real8: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs ujub:G(0,79)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs uilb:G(0,80)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs uiub:G(0,81)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs ujlb:G(0,82)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs uymax:G(0,83)=xsarray1_real8: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs uxmax:G(0,84)=xsarray1_real8: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs uxmin:G(0,85)=xsarray1_real8: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs vxmin:G(0,86)=xsarray1_real8: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs vtime:G(0,87)=xsarray3_real8: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs viub:G(0,88)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs version:G(0,89)=@S;ar(0,2);1;5;(0,7) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs uymin:G(0,90)=xsarray1_real8: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs varnam:G(0,91)=ar(0,2);0;799;(0,73) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs vilb:G(0,92)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs vjlb:G(0,93)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs vjub:G(0,94)=xsarray1_int4: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs vname:G(0,95)=ar(0,2);0;4004;(0,96)=@S;ar(0,2);1;100;(0,7) in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs vxmax:G(0,97)=xsarray1_real8: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs vymin:G(0,98)=xsarray1_real8: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs vymax:G(0,99)=xsarray1_real8: in Build/libMODS.a(mod_ncparam.o)
ld: warning: can't find atom for N_GSYM stabs amm:G(0,23)=r(0,8);8;0; in Build/libUTIL.a(ran_state.o)
ld: warning: can't find atom for N_GSYM stabs iran0:G(0,8) in Build/libUTIL.a(ran_state.o)
ld: warning: can't find atom for N_GSYM stabs iran:G(0,24)=xsarray1_int4: in Build/libUTIL.a(ran_state.o)
ld: warning: can't find atom for N_GSYM stabs nran:G(0,25)=xsarray1_int4: in Build/libUTIL.a(ran_state.o)
ld: warning: can't find atom for N_GSYM stabs kran:G(0,26)=xsarray1_int4: in Build/libUTIL.a(ran_state.o)
ld: warning: can't find atom for N_GSYM stabs jran0:G(0,8) in Build/libUTIL.a(ran_state.o)
ld: warning: can't find atom for N_GSYM stabs jran:G(0,27)=xsarray1_int4: in Build/libUTIL.a(ran_state.o)
ld: warning: can't find atom for N_GSYM stabs mran0:G(0,8) in Build/libUTIL.a(ran_state.o)
ld: warning: can't find atom for N_GSYM stabs kran0:G(0,8) in Build/libUTIL.a(ran_state.o)
ld: warning: can't find atom for N_GSYM stabs lenran:G(0,8) in Build/libUTIL.a(ran_state.o)
ld: warning: can't find atom for N_GSYM stabs mran:G(0,28)=xsarray1_int4: in Build/libUTIL.a(ran_state.o)
ld: warning: can't find atom for N_GSYM stabs nran0:G(0,8) in Build/libUTIL.a(ran_state.o)
ld: warning: can't find atom for N_GSYM stabs ranseeds:G(0,29)=xsarray2_int4: in Build/libUTIL.a(ran_state.o)
ld: warning: can't find atom for N_GSYM stabs rans:G(0,8) in Build/libUTIL.a(ran_state.o)
ld: warning: can't find atom for N_GSYM stabs ranv:G(0,30)=xsarray1_int4: in Build/libUTIL.a(ran_state.o)
ld: warning: can't find atom for N_GSYM stabs seq:G(0,8) in Build/libUTIL.a(ran_state.o)
ld: warning: can't find atom for N_GSYM stabs grid:G(0,4)=xsarray1_t_grid: in Build/libMODS.a(mod_grid.o)
ld: warning: can't find atom for N_GSYM stabs deflate_level:G(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs deflate:G(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs cmode:G(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs dim_name:G(0,464)=ar(0,3);0;49;(0,446) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs dim_id:G(0,465)=ar(0,3);0;49;(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs dim_size:G(0,466)=ar(0,3);0;49;(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs n_gatt:G(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs n_dim:G(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs ncformat:G(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs n_vatt:G(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs n_var:G(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs n_vdim:G(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs rec_size:G(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs rec_id:G(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs var_achar:G(0,467)=ar(0,3);0;49;(0,455) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs shuffle:G(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs var_kind:G(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs var_dsize:G(0,468)=ar(0,3);0;4;(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs var_dids:G(0,469)=ar(0,3);0;4;(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs var_afloat:G(0,470)=ar(0,3);0;49;(0,159) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs var_aname:G(0,471)=ar(0,3);0;49;(0,446) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs var_aint:G(0,472)=ar(0,3);0;49;(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs var_dname:G(0,473)=ar(0,3);0;4;(0,446) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs var_dim:G(0,474)=ar(0,3);0;3499;(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs var_id:G(0,475)=ar(0,3);0;699;(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs var_flag:G(0,476)=ar(0,3);0;699;(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs var_natt:G(0,477)=ar(0,3);0;699;(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs var_name:G(0,478)=ar(0,3);0;699;(0,446) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs var_ndim:G(0,479)=ar(0,3);0;699;(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs var_type:G(0,480)=ar(0,3);0;699;(0,3) in Build/libMODS.a(mod_netcdf.o)
ld: warning: can't find atom for N_GSYM stabs mixing:G(0,4)=xsarray1_t_mixing: in Build/libMODS.a(mod_mixing.o)
ld: warning: can't find atom for N_GSYM stabs average:G(0,4)=xsarray1_t_average: in Build/libMODS.a(mod_average.o)
ld: warning: can't find atom for N_GSYM stabs coupling:G(0,4)=xsarray1_t_coupling: in Build/libMODS.a(mod_coupling.o)
ld: warning: can't find atom for N_GSYM stabs ocean:G(0,4)=xsarray1_t_ocean: in Build/libMODS.a(mod_ocean.o)
ld: warning: can't find atom for N_GSYM stabs diags:G(0,4)=xsarray1_t_diags: in Build/libMODS.a(mod_diags.o)
ld: warning: can't find atom for N_GSYM stabs forces:G(0,4)=xsarray1_t_forces: in Build/libMODS.a(mod_forces.o)
rm -f -r /Users/lrasmuson/make_macros.mk

Is this an issue because of the Netcdf or is this a completely different problem I am running into.

Thanks a bunch for the help,
Leif
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kate
Posts: 4091
Joined: Wed Jul 02, 2003 5:29 pm
Location: CFOS/UAF, USA

Re: Netcdf 3.6.3 problem

#5 Unread post by kate »

This is something else, but they look like warnings, not errors. Did it successfully create an executable?
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m.hadfield
Posts: 521
Joined: Tue Jul 01, 2003 4:12 am
Location: NIWA

Re: Netcdf 3.6.3 problem

#6 Unread post by m.hadfield »

That's not netCDF-related. The missing symbols are ROMS variables. For example to take the first two

Code: Select all

ld: warning: can't find atom for N_GSYM stabs rx0:G(0,3) in Build/libMODS.a(mod_scalars.o)
ld: warning: can't find atom for N_GSYM stabs r0:G(0,158)=xsarray1_real8: in Build/libMODS.a(mod_scalars.o)
The symbols rx0 and r0 are variables declared in module mod_scalars, in source code file mod_scalars.F.

I've never seen error messages like that. Weird. You're using Gfortran, right? What version? What OS?

A Google search on "can't find atom for N_GSYM stabs" shows up some interesting info. Possibly something about debugging symbols and specific to Macs??
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LRasmuson
Posts: 9
Joined: Mon Feb 28, 2011 5:48 pm
Location: Oregon Institute of Marine Biology

Re: Netcdf 3.6.3 problem

#7 Unread post by LRasmuson »

I did get an oceanG file after running the make.

I am using gfortran 4.2.3 and running it on Mac OS 10.6.8. I tried running $./oceanG < ROMS/External/ocean_upwelling.in > log & and the upwelling example seemed to come together OK. So it seems like it worked but is just not allowing finding all of the variables.

I searched in google for "can't find atom for N_GSYM stabs" and it seems that there may be an error from using gfortran 4.2.3? If I were to remove 4.2.3 and move to a newer edition it seems like I may be able to solve some of the problems. If I were to update gfortran would I need to go through and redo the install on netcdf? I am very new to all of this and am teaching myself so I really appreciate the help.

Leif
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m.hadfield
Posts: 521
Joined: Tue Jul 01, 2003 4:12 am
Location: NIWA

Re: Netcdf 3.6.3 problem

#8 Unread post by m.hadfield »

LRasmuson wrote:If I were to update gfortran would I need to go through and redo the install on netcdf? I am very new to all of this and am teaching myself so I really appreciate the help.
You're unlucky to have run into such an obscure problem so early in your learning curve.

You probably wouldn't need to rebuild netCDF if you upgraded Gfortran, but I'm not making any guarantees. Over the life of Gfortran there have been a few changes in the format it uses for Fortran 90 module files (the ones with the .mod extension). But rebuilding netCDF doesn't take very long, so it's worth doing just in case, in my opinion.

The environment variable USE_DEBUG (which is often set in build.bash) controls whether you build with Fortran debugging flags. Turning them on is a good idea when testing new code, but slows execution down substantially.
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